The semester break has begun and is longer than usual this year due to the pandemic. This important period is used to complete exams and assignments and also for research. Additionally, in this interim period, our institute’s researchers are conducting seven intensive courses in various fields. These courses provide students with an exceptional scientific toolbox and highlight the unique research undertaken in our institute. These courses are open to graduate students from all academic institutions in Israel, also presenting an opportunity for these students to become familiar with the Sede Boqer Campus. More information regarding the courses can be found below and also at The Albert Katz International School for Desert Studies.
If you regularly visit the institute's building, you surely could not have missed the amazing photo exhibition displayed in the lobby. The exhibition “Italian Routes: The Italian Mountains, Climate Change and Mountaineering” was initiated and supported by the Italian Ministry of Foreign Affairs and International Cooperation in collaboration with the Macromicro Non-Profit Association. The exhibition is accompanied by two webinars including FAAB and Italian researchers. The webinars are open to everyone, and participation in them is highly recommended. In this context, I would like to thank Prof. Aaron Fait who has expertly nurtured the constant connection between our community and our Italian colleagues. The connections that Aaron has made will certainly help to solve the food production problems that our countries share at a time when we are all experiencing climate change.
Last month, an important meeting was held between researchers from the Volcani Institute, mainly from the Gilat Research Center, and researchers from our institute, together with students who are jointly supervised by these institutions’ researchers. There are currently seven such students, and four more will join next semester. The connection between the institutions has always been good, and soon, we will try to strengthen it further. Each institution has inherent advantages, and if we do it right, we can improve our academic and research relationships. Towards the end of the semester break, researchers from our institute will visit the Gilat Research Center to get to know the research infrastructure, as well as to strengthen the academic connections.
In this newsletter, you will be impressed by the extensive activities underway at the institute. The institute's researchers have received an impressive number of research grants that support our unique research. I sincerely hope that the pace of grant awards will continue to enable fruitful and high-quality research.
Meet the Studens
Kidanemaryam Reta
My name is Kidanemaryam Reta, and I am a PhD student in the French Associates Institute for Agriculture & Biotechnology of Drylandsand I am jointly supervised by Prof. Aaron Fait and Prof. Naftali Lazarovitch. I came
from Addis Ababa, the capital city of Ethiopia and headquarters of the African Union. I received my BSc and MSc degrees in the field of plant sciences from Haramaya University and Jimma University, respectively, in Ethiopia.
While earning my BSc degree, a profound interest in undertaking a deep study on plants developed in me. To pursue this interest, I completed my MSc degree. But the hunger for doing more in the field of plant sciences, especially in the current climatic
conditions that threaten world agriculture and environmental sustainability, seemed never-ending in me. So, I decided to do a further degree to investigate the scientific fundamentals in the field of dryland agricultural biotechnology.
I came to Israel in October 2021 for my PhD degree to study in the field of Agriculture & Biotechnology of Drylands with the dream of learning cutting-edge arid agricultural approaches and techniques under the supervision of Professor Aaron Fait
and Professor Naftali Lazarovitch. Thus, I can hopefully contribute to the agricultural development in my home country.
From the start of my PhD journey, my advisors introduced me to the entirely new and fascinating world of integrated research approaches in desert studies to unveil the multi-omics response (such as metabolomic, transcriptomic, and genomic responses)
of the different novel grapevine rootstocks under drought and salinity stress. Interestingly, I dove into a new methodology, a new high-throughput analytical tool with the integration of high-throughput physiology-based stress response phenotyping
platforms to study the physiological change and omics response of the rootstocks when they are exposed to a combined salinity and drought stressor.
Currently, we are doing a study in a vineyard established at the BIDR, in the field and the greenhouse, to reveal the real omics response of the novel grapevine rootstocks to combined salt and drought stress conditions. Jointly, we are dealing with
the metabolic changes of the grapevine berries from the desert to the bottle in our winery. Hence, we are keen to examine the wine quality and yield. Parallelly, to identify the most significant rootstock for combined stress tolerance, we are
examining the rootstocks in a separate greenhouse experiment to deal with their transpiration efficiency, root system architecture, and other physiological parameters. In this case, we are interested in enhancing crop performance under saline
soil and drought stress conditions by optimizing transpiration efficiency and root morphological traits to ultimately increase crop quality and yield.
Khin Maw Kyi
My name is Khin Maw Kyi, and I'm a master's degree student studying with Dr. Nina Kamennaya as my advisor. I come from Myanmar, located in the western portion of mainland Southeast Asia. I received a bachelor's degree in Myanmar from the University of Agriculture in 2018 and decided to continue studying for a master’s degree at Ben-Gurion University of the Negev’s French Associates Institute for Agriculture and Biotechnology of Drylands. My research focuses on biological soil crusts (BSCs) from arid and hyper-arid regions. My supervisor exposed me to the interesting world of cyanobacteria in drylands during my master's program, as well as a novel way to study them. BSCs are surface soil communities found in arid and semiarid environments all over the world. Cyanobacteria, oxygenic phototrophs, are the most essential components of biological soil crusts because of their ability to synthesize organic matter via oxygenic photosynthesis. Dryland BSCs supply a considerable amount of fixed carbon. Cyanobacteria's ability to produce extracellular polysaccharides (EPS) is controlled by both nutritional and environmental factors. The availability of inorganic carbon species(Ci,: HCO3- and CO2)to cyanobacteria is dependent on a CO2 concentrating process that acquires and concentrates CO2 within the cell.
The study project's overall purpose is to examine the number and diversity of photoautotrophs in natural soil crusts from arid and hyper-arid environments, as well as the impact of increased Ci availability on photoautotrophic communities in the soil
crusts. Our lab's research focuses on the physiology and ecology of cyanobacteria. We use molecular biology, microscopy and imaging, and field work in our project.
Desert truffles are edible hypogeous (forming fruit bodies below ground) fungi that grow in semi-arid and arid areas. They are highly valued for both their culinary and medicinal properties in the Mediterranean basin, the Middle East and the Gulf
areas. Desert truffles form mycorrhizae mostly with plants belonging to the Cistaceae family, mainly with Helianthemum species. These truffles are still, usually, collected from the wild, but loss of habitats due to urbanization, desertification,
intensive agriculture and global warming, along with an urgent need to develop new crops adapted to arid conditions, are currently hastening efforts towards their domestication. Here, we sum up the successful research leading to cultivation of
this crop, based on plots that were established in sandy to silt soils with high pH values and low mineral contents. We report suitable methods for the production of mycorrhized seedlings and preferred planting methods. We found that under natural
conditions, yields are affected by water availability, so irrigation regimes to ensure good yields were sought. Although good yields were indeed obtained in some years, fluctuations in yields over the years were significant; the reasons for this
are not entirely clear and are currently under study. This crop is particularly well suited to relatively marginal conditions, but prospects for establishment of desert truffles as a niche crop for arid and semi-arid areas depend on further improvements
in yields.
This project was conducted in collaboration with Mr. Ofer Guy, MOP Ramat-Negev.
This research was funded by the Israel Ministry of Agriculture, grant no. 16-13-000
Title:Improving the production of vitamin B12 by the food grade duckweed Wolffia globosa
Principal Investigators:Osnat Gillor, Inna Khozin-Goldberg
Abstract:
The overall goal is to develop cultivation protocols for the aquatic plant Wolffia globosa to improve the nutritional value and vitamin B12 production of this potent producer of food ingredients. We are developing an LC-MS -based protocol for B12 quantification. The content and profile of fatty acids will be determined.
Title:Agro-development of the Columnar Cactus 'Koubo' as an Exotic New Fruit Crop in Israel
Principal Investigators: Noemi Tel-Zur
Abstract:
The overall goal of this proposal is to develop the full commercial potential of koubo (Cereus peruvianus, Cactaceae) as a fruit crop in Israel. Today, koubo is a very profitable crop, cultivated on a small scale in Israel. We aim to provide improved cultivars to be offered to Israeli farmers, especially in the Negev. In the long term, we envision that koubo cultivation can be extended into an entire food industry. This project will contribute to the comprehensive development of a new crop that is expected to command excellent prices in both domestic and European markets, thus promoting development in the Negev.
Title:Elucidating the link between viticulture practices, grapevine metabolism and the presence of spider mites.
Principal Investigators: Aaron Fait, Vered Tzin
Abstract:
A newly emerged pest is hitting Negev grapevines. We propose to study the mechanisms underlying the interaction between grapevine genetics, the use of imidacloprid (a common pesticide) in the vineyards, and spider mite infestation.
Title:Developing and implementing satellite-based machine learning algorithms for early detection and monitoring of wildfires
Principal Investigators: Arnon Karnieli
Abstract:
Date palms are a valuable cash crop and a healthy fruit, intensively grown in Israel's Jordan and Arava Valleys. However, this sector suffers heavily as the trees are extremely sensitive to pests, with the most severe damage caused by the Rhynchophorus Ferrugineus ("red palm weevil"). The weevil’s larvae damage the trees' vascular system and “eat” the trees from the interior, causing irrevocable damage and severe yield reduction; eventually the trees die, and the investment is lost. Since the larvae are hidden within the inner parts of the stem, identifying them is challenging before severe damage is already a fact. The project goal is to develop a systematic monitoring activity accomplished by advanced machine learning algorithms for early detection of red palm weevil to protect palms' health.
MERC
Title:Factors that contribute to disease transmission and plant recognition by insect vectors
Team:
Israel: Murad Ghanim (ARO) and Vered Tzin (BGU)
Jordan: Mohammad Al-Mazra'awi and Ghandi Anfoka, Al Balqa Applied University, Al-Salt
Egypt: Ahmed Abd El-Aziz Zakaria El-Said Kheder andAhmed Abdelrehim, Plant Pathology Research Institute, Agricultural Research Centre, Giza
Abstract:
It is evident that conventional agriculture will continue to face an increasing number of stress factors that limit and decrease productivity. Drought and salinity are among the most common stress factors that predominate in the semi-arid Middle Eastern climate, which ae also believed to influence the plant interactions with other biotic (insects and pathogens) factors. In this semi-arid climate, vector-borne plant viruses are critical in many crops, mainly field, vegetable, and cereal crops, and cause crop losses that sometimes reach up to 100% losses. It is known that upon virus infection, plants emit Virus-Induced Volatile Organic Compounds (VI-VOCs), which attract insects and aid in virus transmission, a manipulation that is thought to be induced by viruses as an evolutionary adaptation to aid in their own transmission. Understanding virus disease transmission and plant recognition by insects in the agro-ecosystems in this region, and their effects on specific crops is essential for manipulating these interactions and developing novel means for reducing insect pest and disease damage without the need to use chemical pesticides. There is an increased demand to reduce the use of toxic pesticides in agriculture and devise better approaches to combat the damage of insect pests. Thus, the main aim of this MERC regional project is to identify VI-VOCs in virus-vector-plant systems in the region. Such VOCs can be used for devising monitoring and/or interference methods between insects and plants to reduce virus transmission and plant exposure to insect pests, leading to better productivity in major crops in the region.
Ministry of Innovation, Science & Technology - Space Agency
Principal Investigator:Arnon Karnieli
Title:Developing and implementing satellite-based machine learning algorithms for early detection and monitoring of wildfires
Abstract:
The proposal deals with studying Earth's resources from space and focuses on the development and application of a deep-learning based machine learning algorithm for early detection and monitoring of wildfires. Fires are a threat to human health and life as well as the environment. Significant damage can be caused to vegetation, animals, and property. In recent years, because of climate change, fires have intensified and increased in frequency. Models predict that these exceptional destructive events will continue. Therefore, fast and accurate detection in real-time is a crucial factor in wildfire fighting and monitoring fire outbreaks. However, the current methods of detecting fires from ground observations are a very limited practice.
Therefore, the goal of the study is to develop, verify, and implement, using a deep-learning based algorithm, a system for detecting and monitoring fires in real-time, based on a database of a future geostationary satellite images. The Meteosat Third Generation (MTG) satellite, scheduled for launch next year (2022), will have onboard a payload called the Flexible Combined Imager (FCI). The FCI will have enhanced radiometric, spectral (11-channel), spatial capabilities (between 0.5 and 2 km, depending on wavelength), and revisit imaging (10 minutes) from the current generation (MSG). The research hypothesis is that characterizing fires through machine learning will allow their detection immediately upon onset.
The proposed research is interdisciplinary and will be conducted by two groups from different and complementary disciplines: geoinformatics and computer science. The remote sensing lab of the Institutes for Desert Research at Ben-Gurion University will work on collecting the satellite images, creating a database of fire events, and field verification. The Department of Computer Science and Applied Mathematics team at the Weizmann Institute will develop the machine-learning algorithm to detect fires from satellite images. Both teams will jointly work on the final implementation.
Besides the immediate importance of the application for the State of Israel, the study has practical and economic potential in the short term of a few years after the end of the project. Since the countries of Southern Europe are experiencing burning events that have increased and intensified in recent years, and since the enhanced European satellite will only be launched in about a year, the success of the proposed project may improve the competitive ability of Israel and its position on the world science and technology front. We anticipate that more countries will promote scientific cooperation, striving to implement the methodology developed.
The workplan also includes a status seminar and outreach plan.
Chief Scientist of the Ministry of Agriculture and Rural Development
Title:Development of an automatic system for characterizing the root system for optimal irrigation and fertilization
Principal Investigators: Naftali Lazarovitch, Ofer Hadar, Faculty of Engineering Sciences, Jhonathan E. Ephrath
Abstract:
One of the challenges in developing optimal irrigation and fertilization regimes is the ability to accurately describe water and fertilizer uptake by roots under different growing conditions. Uptake depends on the soil water status and also on the density
of the roots and their function. There is very little continuous information about the root system, and as a result, it is very difficult to determine optimal irrigation and fertilization regimes. Knowing the dynamic properties of the root system
will help with optimal irrigation and fertilization and will increase the ratio between the crop yield and the inputs applied in the field (water, fertilizer, etc.). The aim of this research is to develop:
a machine-learning-based algorithm for evaluating the properties of the root zone
an inverse solution for estimating parameters of root distribution functions
a decision support system for fertigation scheduling
Budget: 641,000 NIS for three years
Chief Scientist of the Ministry of Agriculture and Rural Development
Title:Developing a system for providing dynamic, high-resolution irrigation and fertilization recommendations for Israel
Principal Investigators:Naftali Lazarovitch, Eran Tas, Hebrew University of Jerusalem, Offer Rozenstein, Volcani Institute
Abstract:
The project aims to develop a recommendation system for growers on irrigation and fertilization of their specific crops dynamically and continuously. The specific objectives are 1) to improve potential evapotranspiration and precipitation predictions
up to four days forward; 2) to estimate crop properties using remote sensing; 3) to assimilate relevant products into a sub-surface water and nutrient flow and transport model to devise recommendations to growers; and 4) to account for measurement
uncertainty in an objective function to represent the desired plant stress level and optimize water and nutrient use to limit environmental pollution due to inadequate irrigation/ fertilization.
The potential contribution of this study includes improving the water and nutrient use efficiency by accurate irrigation and, as a result, increasing the grower’s income. Increasing the fertilizer-use efficiency will reduce groundwater contamination as
a result of nutrient leaching. An improved evapotranspiration prediction will reduce yield reduction as a result of drought stress.
Budget: 699,000 NIS for three years
Ministry of Innovation, Science and Technology: Israel-France Collaboration
Title: Developing new eco-responsible iron colloidal phases to improve Fe availability and soil physico-chemical properties for agriculture.
Principal Investigators: Ilya Gelfand, Mathieu Pedrot
Project Description:
A new collaboration between BGU (Ilya Gelfand) and the University of Rennes 1 (Mathieu Pedrot), France. The project is led by Edwige Demangeat, a postdoctoral researcher in the Environnemental Biogeochemistry Lab. The project aims at improving the Fe bioavailability and the soil chemical properties (such as cation exchange capacity and nutrient cycling) by developing eco-friendly soil amendment based on Fe colloids. The project will further study the effects induced by the application of Fe colloidal phases on soil trace gas emissions and the nitrogen (N) cycle.
JNF
Title: Examine the effect of soil stoniness and the presence of biological soil crusts on ecological functioning of water harvesting systems (shihim).
Principal Inestigators: Nina Kamennaya, Eli Zaady (ARO), Hezi Yizhaq (AYDSEEP) and Elli Groner (ADSSC).
Abstract:
In the semi-arid northern Negev, the Jewish National Fund (JNF) established water harvesting systems (shihim), which sustain the growth of planted trees. In these systems, trees are planted in sink areas, which receive water as runoff from contributing areas. Besides water availability, tree growth depends on availability of nutrients. We hypothesize that increased soil stoniness and the presence of developed biological soil crusts in the source area increase the overall water content of the soil and, thereby, enhance nutrient supply and recycling by the functional microbiome and mesofauna community, respectively. In this project, we will (1) estimate the potential of the functional microbiome to fix carbon and nitrogen and to contribute organic acids, which increase phosphorus bioavailability, and (2) characterize the composition of the mesofauna. These parameters, determined for “shihim” systems with high stoniness and well-developed biocrusts versus those with low stoniness and undeveloped biocrusts, will reflect the ability of each ecological system type to increase the resources essential for survival under drought conditions.
An exhibition initiated and supported by the Italian Ministry of Foreign Affairs and International Cooperation in collaboration with the Macromicro Non-Profit Association
Concept and the curatorship of Fabiano Ventura
The Embassy of Italy in Israel and the Italian Cultural Institute in Tel Aviv were inspired to present Ventura's evocative and disturbing photographic documentation of the fragility of high-altitude environments right in the heart of the Negev Desert,
an area no less vulnerable and equally threatened by climate change.
The exhibition will be open to visitors from 20 December 2021 until 16 February 2022 at the French Associates Institute for Biotechnology and Agriculture of Drylands (Bldg 25), "Italian Mountains" in the George Evens Family Auditorium
(Bldg 19), "A look at the world".
Sunday–Thursday, 9:00–17:00
Friday, 9:00-12:30, group visits only.
Early reservation is required.
Entrance in accordance with the guidelines of the Health Ministry's Green Pass.
Children must be accompanied by an adult.
For information on arrival and group coordination, please contact Yamit, BIDR - BGU, e-mail: [email protected], tel. 08-6563449